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1

A PDE multiscale model of hepatitis C virus infection can be transformed to a system of ODEs

Kitagawa, Kosaku, Nakaoka, Shinji, Asai, Yusuke, Watashi, Koichi, Iwami, Shingo

Journal:

Journal of Theoretical Biology

Year:

2018

Language:

english

File:

PDF, 589 KB

english, 2018

2

Mathematical Analysis of a Transformed ODE from a PDE Multiscale Model of Hepatitis C Virus Infection

Kitagawa, Kosaku, Kuniya, Toshikazu, Nakaoka, Shinji, Asai, Yusuke, Watashi, Koichi, Iwami, Shingo

Journal:

Bulletin of Mathematical Biology

Year:

2019

Language:

english

File:

PDF, 730 KB

english, 2019

3

Immune impairment in HIV infection: Existence of risky and immunodeficiency thresholds

Shingo Iwami, Tomoyuki Miura, Shinji Nakaoka, Yasuhiro Takeuchi

Journal:

Journal of Theoretical Biology

Year:

2009

Language:

english

File:

PDF, 551 KB

english, 2009

4

Quantifying the effect of Vpu on the promotion of HIV-1 replication in the humanized mouse model

Ikeda, Hiroki, Nakaoka, Shinji, de Boer, Rob J., Morita, Satoru, Misawa, Naoko, Koyanagi, Yoshio, Aihara, Kazuyuki, Sato, Kei, Iwami, Shingo

Journal:

Year:

2016

Language:

english

File:

PDF, 1.26 MB

english, 2016

5

Effect of eclipse phase on quantifying viral dynamics of acute HIV-1 infection in humanized mouse model

Ikeda, Hiroki, Nakaoka, Shinji, Sato, Kei, Misawa, Naoko, Koyanagi, Yoshio, Iwami, Shingo

Journal:

Nonlinear Theory and Its Applications IEICE

Year:

2015

Language:

english

File:

PDF, 354 KB

english, 2015

6

Sporadic on/off switching of HTLV-1 Tax expression is crucial to maintain the whole population of virus-induced leukemic cells

Mahgoub, Mohamed, Yasunaga, Jun-ichirou, Iwami, Shingo, Nakaoka, Shinji, Koizumi, Yoshiki, Shimura, Kazuya, Matsuoka, Masao

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 1.54 MB

english, 2018

7

Immune impairment thresholds in HIV infection

Shingo Iwami, Shinji Nakaoka, Yasuhiro Takeuchi, Yoshiharu Miura, Tomoyuki Miura

Journal:

Immunology Letters

Year:

2009

Language:

english

File:

PDF, 568 KB

english, 2009

8

Dynamical Adaptation of Parental Care

Yasuhiro Takeuchi, Wendi Wang, Shinji Nakaoka, Shingo Iwami

Journal:

Bulletin of Mathematical Biology

Year:

2009

Language:

english

File:

PDF, 493 KB

english, 2009

9

A geographical spread of vaccine-resistance in avian influenza epidemics

Shingo Iwami, Yasuhiro Takeuchi, Xianning Liu, Shinji Nakaoka

Journal:

Journal of Theoretical Biology

Year:

2009

Language:

english

File:

PDF, 341 KB

english, 2009

10

Frequency dependence and viral diversity imply chaos in an HIV model

Shingo Iwami, Shinji Nakaoka, Yasuhiro Takeuchi

Journal:

Physica D: Nonlinear Phenomena

Year:

2006

Language:

english

File:

PDF, 650 KB

english, 2006

11

Possible Application to Medium–term Organ Bioassays for Renal Carcinogenesis Modifiers in Rats Treated with N–Ethyl–N–hydroxyethylnitrosamine and Unilateral Nephrectomy

Yoshio Hiasa, Noboru Konishi, Shingo Nakaoka, Mitsutoshi Nakamura, Seiji Nishii, Yoshiteru Kitahori, Masato Masato

Journal:

Year:

1991

File:

PDF, 535 KB

1991

12

Promoting Effects of Potassium Dibasic Phosphate on Early-stage Renal Carcinogenesis in Unilaterally Nephrectomized Rats Treated with N-Ethyl-N-hydroxyethylnitrosamine

Yoshio Hiasa, Noboru Konishi, Shingo Nakaoka, Toshimitsu Nakamura, Kiyoji Nishii, Masato Ohshima

Journal:

Year:

1992

File:

PDF, 464 KB

1992

13

Expression of nm23-Hl and nm23-H2 Proteins in Prostate Carcinoma

Noboru Konishi, Shingo Nakaoka, Toshihide Tsuzuki, Kyoichi Matsumoto, Yoshiteru Kitahori, Yoshio Hiasa, Takeshi Urano, Hiroshi Shiku

Journal:

Year:

1993

File:

PDF, 422 KB

1993

14

Inhibitory Effect of Potassium Citrate on Rat Renal Tumors Induced by N-Ethyl-N-hydroxyethylnitrosamine Followed by Potassium Dibasic Phosphate

Noboru Konishi, Kiyoharu Nishii, Isao Hayashi, Shingo Nakaoka, Kyoichi Matsumoto, Toru Yabuno, Yoshiteru Kitahori, Yoshio Hiasa

Journal:

Year:

1993

File:

PDF, 485 KB

1993

15

Viral diversity limits immune diversity in asymptomatic phase of HIV infection

Shingo Iwami, Shinji Nakaoka, Yasuhiro Takeuchi

Journal:

Theoretical Population Biology

Year:

2008

Language:

english

File:

PDF, 1.03 MB

english, 2008

16

Expression of pepsinogen II with androgen and estrogen receptors in human prostate carcinoma

Noboru Konishi, Shingo Nakaoka, Kyoichi Matsumoto, Mitsutoshi Nakamura, Shin-ichi Kuwashima, Yoshio Hiasa, Masaki Cho, Hirotsugu Uemura, Yoshihiko Hirao

Journal:

Pathology International

Year:

1999

Language:

english

File:

PDF, 167 KB

english, 1999

17

Distribution and secretory pathways of prostate specific antigen, α1-antichymotrypsin and prostate secretory granules in prostate cancers

Eiwa Ishida, Mitsutoshi Nakamura, Keiji Shimada, Munehiro Kishi, Shingo Nakaoka, Noboru Konishi

Journal:

Pathology International

Year:

2003

Language:

english

File:

PDF, 480 KB

english, 2003

18

Progressive activity in latent prostate carcinoma defined by argyrophilic staining of the nucleolar organizer regions (AgNOR)

Noboru Konishi, Shingo Nakaoka, Toshihide Tsuzuki, Yoshiteru Kitahori, Kiyoharu Nishii, Motokazu Kitamura, Masato Ohshima, Yoshio Hiasa

Journal:

Pathology International

Year:

1994

Language:

english

File:

PDF, 1.37 MB

english, 1994

19

Successful reconstruction of communicating bronchopulmonary foregut malformation associated with laryngotracheoesophageal cleft

Tatsuo Nakaoka, Sadashige Uemura, Tsunehiro Yano, Terutaka Tanimoto, Hiromu Miyake, Shingo Kasahara, Shunji Sano

Journal:

Journal of Pediatric Surgery

Year:

2009

Language:

english

File:

PDF, 173 KB

english, 2009

20

A conservation law for virus infection kinetics in vitro

Kakizoe, Yusuke, Morita, Satoru, Nakaoka, Shinji, Takeuchi, Yasuhiro, Sato, Kei, Miura, Tomoyuki, Beauchemin, Catherine A.A., Iwami, Shingo

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.23 MB

english, 2015

21

Relationships between serum thyroid stimulating hormone levels and development of thyroid tumors in rats treated with N - bis -(2-hydroxypropyl)nitrosamine

Hiasa, Yoshio, Kitahori, Yoshiteru, Kitamura, Motokazu, Nishioka, Hiroto, Yane, Katsunari, Fukumoto, Mitsuru, Ohshima, Masato, Nakaoka, Shingo, Nishii, Seiji

Journal:

Year:

1991

Language:

english

File:

PDF, 392 KB

english, 1991

22

Dynamics of HIV infection in lymphoid tissue network

Nakaoka, Shinji, Iwami, Shingo, Sato, Kei

Journal:

Journal of Mathematical Biology

Year:

2016

Language:

english

File:

PDF, 1.11 MB

english, 2016

23

Modelling Ebola virus dynamics: Implications for therapy

Martyushev, Alexey, Nakaoka, Shinji, Sato, Kei, Noda, Takeshi, Iwami, Shingo

Journal:

Antiviral Research

Year:

2016

Language:

english

File:

PDF, 2.41 MB

english, 2016

24

Effects of sex hormones and PTU on growth of transplantable rat thyroid tumor with estrogen receptor (ER).

YANE, KATSUNARI, TANAKA, OSAMU, MIYAHARA, HIROSHI, MATSUNAGA, TAKASHI, KITAHORI, YOSHITERU, NAKAOKA, SHINGO, HIASA, YOSHIO, NISHIOKA, HIROTO, SUGIMURA, MASAHITO

Journal:

Nippon Jibiinkoka Gakkai Kaiho

Year:

1992

File:

PDF, 1.01 MB

1992

25

Immunohistochemical Analysis of Midkine Expression in Human Prostate Carcinoma

Konishi, Noboru, Nakamura, Mitsutoshi, Nakaoka, Shingo, Hiasa, Yoshio, Cho, Masaki, Uemura, Hirotsugu, Hirao, Yoshihiko, Muramatsu, Takashi, Kadomatsu, Kenji

Journal:

Year:

1999

Language:

english

File:

PDF, 389 KB

english, 1999

26

Immunohistochemical Analysis of Estrogen Receptors in 313 Paraffin Section Cases of Human Thyroid Tissue

Hiasa, Yoshio, Nishioka, Hiroto, Kitahori, Yoshiteru, Yane, Katsunari, Nakaoka, Shingo, Ohshima, Masato, Konishi, Noboru, Nishii, Kiyoharu, Kitamura, Motokazu, Matsunaga, Takashi

Journal:

Year:

2009

File:

PDF, 2.10 MB

2009

27

A method to determine the duration of the eclipse phase for in vitro infection with a highly pathogenic SHIV strain

Kakizoe, Yusuke, Nakaoka, Shinji, Beauchemin, Catherine A. A., Morita, Satoru, Mori, Hiromi, Igarashi, Tatsuhiko, Aihara, Kazuyuki, Miura, Tomoyuki, Iwami, Shingo

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 1.23 MB

english, 2015

28

Number of infection events per cell during HIV-1 cell-free infection

Ito, Yusuke, Remion, Azaria, Tauzin, Alexandra, Ejima, Keisuke, Nakaoka, Shinji, Iwasa, Yoh, Iwami, Shingo, Mammano, Fabrizio

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 2.26 MB

english, 2017

29

Human-Specific Adaptations in Vpu Conferring Anti-tetherin Activity Are Critical for Efficient Early HIV-1 Replication In Vivo

Yamada, Eri, Nakaoka, Shinji, Klein, Lukas, Reith, Elisabeth, Langer, Simon, Hopfensperger, Kristina, Iwami, Shingo, Schreiber, Gideon, Kirchhoff, Frank, Koyanagi, Yoshio, Sauter, Daniel, Sato, Kei

Journal:

Cell Host & Microbe

Year:

2018

Language:

english

File:

PDF, 3.50 MB

english, 2018

30

A 750-MHz electronically tunable resonator using microstrip line couplers for electron paramagnetic resonance imaging of a mouse tumor-bearing leg

Amida, Tatsuya, Nakaoka, Ririko, Komarov, Denis A., Yamamoto, Kumiko, Inanami, Osamu, Matsumoto, Shingo, Hirata, Hiroshi

Journal:

IEEE Transactions on Biomedical Engineering

Year:

2017

Language:

english

File:

PDF, 3.58 MB

english, 2017

31

Impact of the Characteristic Impedance of Coaxial Lines on the Sensitivity of a 750-MHz Electronically Tunable EPR Resonator

Nakaoka, Ririko, Komarov, Denis A., Matsumoto, Shingo, Hirata, Hiroshi

Journal:

Applied Magnetic Resonance

Year:

2018

Language:

english

File:

PDF, 3.31 MB

english, 2018

32

Exome and copy number variation analyses of Mayer–Rokitansky–Küster– Hauser syndrome

Takahashi, Kazumi, Hayano, Takahide, Sugimoto, Ryota, Kashiwagi, Hirofumi, Shinoda, Mari, Nishijima, Yoshihiro, Suzuki, Takahiro, Suzuki, Shingo, Ohnuki, Yuko, Kondo, Akane, Shiina, Takashi, Nakaoka,

Journal:

Human Genome Variation

Year:

2018

Language:

english

File:

PDF, 718 KB

english, 2018

33

Immunohistochemical Evaluation of Estrogen Receptor Status in Benign Prostatic Hypertrophy and in Prostate Carcinoma and the Relationship to Efficacy of Endocrine Therapy

Konishi, Noboru, Nakaoka, Shingo, Hiasa, Yoshio, Kitahori, Yoshiteru, Ohshima, Masato, Samma, Shoji, Okajima, Eigoro

Journal:

Year:

1993

Language:

english

File:

PDF, 864 KB

english, 1993

34

Immunohistochemical Detection of Estrogen Receptors in Paraffin Sections of Human Thyroid Tissues

Hiasa, Yoshio, Nishioka, Hiroto, Kitahori, Yoshiteru, Yane, Katsunari, Nakaoka, Shingo, Ohshima, Masato, Konishi, Noboru, Nishii, Kiyoharu, Kitamura, Motokazu, Sugimura, Masahito

Journal:

Year:

1991

Language:

english

File:

PDF, 861 KB

english, 1991

35

Safety of Cold Snare Polypectomy in Patients Receiving Treatment with Antithrombotic Agents

Arimoto, Jun, Chiba, Hideyuki, Ashikari, Keiichi, Fukui, Ryo, Anan, Hideyuki, Tachikawa, Jun, Suto, Takuma, Kawano, Naoya, Niikura, Toshihiro, Kuwabara, Hiroki, Nakaoka, Michiko, Kato, Shingo, Ida, To

Journal:

Digestive Diseases and Sciences

Year:

2019

Language:

english

File:

PDF, 755 KB

english, 2019

36

Revealing uninfected and infected target cell dynamics from peripheral blood data in highly and less pathogenic simian/human immunodeficiency virus infected Rhesus macaque

Hara, Akane, Iwanami, Shoya, Ito, Yusuke, Miura, Tomoyuki, Nakaoka, Shinji, Iwami, Shingo

Journal:

Journal of Theoretical Biology

Year:

2019

Language:

english

File:

PDF, 1.56 MB

english, 2019

37

Quantifying the antiviral effect of APOBEC3 on HIV-1 infection in humanized mouse model

Kurusu, Tatsuya, Kim, Kwang Su, Koizumi, Yoshiki, Nakaoka, Shinji, Ejima, Keisuke, Misawa, Naoko, Koyanagi, Yoshio, Sato, Kei, Iwami, Shingo

Journal:

Journal of Theoretical Biology

Year:

2020

File:

PDF, 1.18 MB

2020

38

Should a viral genome stay in the host cell or leave? A quantitative dynamics study of how hepatitis C virus deals with this dilemma

Iwanami, Shoya, Kitagawa, Kosaku, Ohashi, Hirofumi, Asai, Yusuke, Shionoya, Kaho, Saso, Wakana, Nishioka, Kazane, Inaba, Hisashi, Nakaoka, Shinji, Wakita, Takaji, Diekmann, Odo, Iwami, Shingo, Watashi

Journal:

Year:

2020

File:

PDF, 2.21 MB

2020

39

Modeling Borna disease virus in vitro spread reveals the mode of antiviral effect conferred by an endogenous bornavirus-like element

Kim, Kwang Su, Yamamoto, Yusuke, Nakaoka, Shinji, Tomonaga, Keizo, Iwami, Shingo, Honda, Tomoyuki

Journal:

Journal of Virology

Year:

2020

File:

PDF, 2.23 MB

2020

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